Author

Amir Mohammad Arsh

Tampere UniversityORCID 0000-0003-1431-9816Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:E. coli· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:simulation· 1

Frequent Co-Authors

Andre Sanches RibeiroiD· 2 shared Rahul JagadeesaniD· 2 shared M. M. AzevedoiD· 1 shared Suchintak DashiD· 1 shared Vatsala ChauhaniD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 8 mutual co-author links

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2 shared papersMicrobiology

Andre Sanches RibeiroORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 16, 2025

Thermal shifts can override the effects of Transcription-targeting Antibiotics

Rahul Jagadeesan, Amir Mohammad Arsh, Vatsala Chauhan…·Andre Sanches Ribeiro

The paper shows that thermal shifts override antibiotic effects in E. coli by altering transcriptomes and physiological responses across multiple levels.

DOI 10.1101/2025.10.16.682818

E. colibulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintSep 2, 2025

Mechanisms shaping the transcriptome of E. coli to non-lethal rifampicin stress

M. M. Azevedo, Amir Mohammad Arsh, Rahul Jagadeesan, Andre Sanches Ribeiro

This study identifies genome-wide transcriptional mechanisms in E. coli under non-lethal rifampicin stress, showing gene regulatory network structure influences response dynamics and phenotypic adaptations.

DOI 10.1101/2025.09.02.673683

E. colibulk RNA-seq

𝕏 PostBluesky