Author

Henryk Flachowsky

Julius Kühn-InstitutORCID 0000-0003-1440-1895Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:genome assembly· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Organism:plant (other)· 2 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

Andreas PeiliD· 5 shared Ofere Francis EmerieweniD· 5 shared Thomas WöhneriD· 5 shared Jens KeilwageniD· 3 shared Matthias PfeiferiD· 3 shared Alexander H. J. WittenbergiD· 2 shared Harrie Schneiders· 2 shared Janne LempeiD· 2 shared

Activity by Year

2021-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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5 shared papersGenomics

Andreas PeilORCID

Mutual co-authors in cluster

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5 papers

Recent·Most cited

GeneticsFrontiers in Plant SciencePeer-reviewedJun 3, 2026

Inoculation of Malus baccata 'Jackii'-derived offspring and QTL analysis reveal a polygenic inheritance pattern of apple blotch resistance

Matthias Pfeifer, Andreas Peil, Henryk Flachowsky…·Thomas Wöhner

This study inoculates Malus baccata 'Jackii'-derived offspring and performs QTL analysis to show apple blotch resistance is polygenic with four key QTLs identified.

DOI 10.3389/fpls.2026.1854916

statistical modelGWAS / association mapping

𝕏 PostBluesky

GeneticsFrontiers in Plant SciencePeer-reviewedFeb 12, 2026

Genetic mapping, marker development, and identification of candidate genes for powdery mildew resistance in Malus baccata 'Jackii'

Matthias Pfeifer, Leonard Kurzweg, Buist Mucaj…·Thomas Wöhner

This study constructs genetic maps, develops markers, and identifies candidate genes for powdery mildew resistance in Malus baccata 'Jackii' using SNP and SSR data from an F1 population.

5 citationstop 1%

statistical modelgene regulatory network inference

𝕏 PostBluesky

GenomicsScientific DataPeer-reviewedJan 8, 2026

High-quality haplotype-resolved genome assembly and annotation of Malus baccata 'Jackii'

Matthias Pfeifer, Ofere Francis Emeriewen, Henryk Flachowsky…·Thomas Wöhner

The paper presents a high-quality haplotype-resolved genome assembly and annotation of Malus baccata 'Jackii', revealing detailed gene content and structure.

3 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsFrontiers in Plant SciencePeer-reviewedDec 1, 2023

The structure of the tetraploid sour cherry 'Schattenmorelle' (Prunus cerasus L.) genome reveals insights into its segmental allopolyploid nature

Thomas Wöhner, Ofere Francis Emeriewen, Alexander H. J. Wittenberg…·Henryk Flachowsky

The paper sequences and analyzes the genome of the sour cherry cultivar Schattenmorelle to reveal its segmental allopolyploid structure and evolutionary history.

12 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

GenomicsGenomicsPeer-reviewedNov 1, 2021

The draft chromosome-level genome assembly of tetraploid ground cherry (Prunus fruticosa Pall.) from long reads

Thomas Wöhner, Ofere Francis Emeriewen, Alexander H. J. Wittenberg…·Henryk Flachowsky

The paper presents a chromosome-level genome assembly of tetraploid ground cherry using long-read sequencing technology and reports annotated genes and plastid sequences.

26 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky