Author

Jason Travis

Translational Genomics Research InstituteORCID 0000-0003-1546-170XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Organism:C. elegans· 1

Frequent Co-Authors

Darrin LemmeriD· 2 shared Paul KeimiD· 2 shared Adam J. VazqueziD· 1 shared Amalee E. Nunnally· 1 shared Chandler C. RoeiD· 1 shared Chandler Roe· 1 shared Charles H. D. Williamson· 1 shared Charles Williamson· 1 shared

Activity by Year

2016-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Darrin LemmerORCID

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2 papers

Recent·Most cited

GenomicsMicrobial GenomicsPeer-reviewedMay 20, 2019

A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network

Charles H. D. Williamson, Nathan E. Stone, Amalee E. Nunnally…·Jason W. Sahl

This study uses whole genome sequencing to analyze C. difficile isolates and identifies multiple introductions and transmission events in a healthcare network, highlighting genetic variability and antimicrobial resistance.

8 citations

C. eleganswhole-genome sequencing

𝕏 PostBluesky

BioinformaticsMicrobial GenomicsPeer-reviewedAug 25, 2016

The Northern Arizona SNP Pipeline (NASP): accurate, flexible, and rapid identification of SNPs in WGS datasets

Jason W Sahl, Darrin Lemmer, Jason Travis…·Paul Keim

NASP is a WGS pipeline for SNP detection in bacterial genomes, showing comparable or better performance than existing tools with greater flexibility.

DOI 10.1099/mgen.0.000074

bacteria (other)whole-genome sequencing

𝕏 PostBluesky