Author

Xiaomeng Gao

Chinese Academy of SciencesORCID 0000-0003-1717-6494Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Assay:Hi-C· 2 Organism:human· 2 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Bingxiang XuiD· 2 shared Zhihua ZhangiD· 2 shared Bo YangiD· 1 shared Feifei LiiD· 1 shared Feifei LiiD· 1 shared Haiying Zhu· 1 shared Hong ZhuiD· 1 shared Ji CaoiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Bingxiang XuORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsAdvanced SciencePeer-reviewedOct 28, 2026

STRIDE: A Sequencing Depth-Insensitive Metric for Robust Comparison between Sparse Chromosome Conformation Capture Data

Bingxiang Xu, Xiaomeng Gao, Weichu Tao…·Feifei Li

This paper introduces STRIDE, a sequencing depth-insensitive metric for comparing sparse single-cell Hi-C data, enabling robust analysis of 3D genome organization.

DOI 10.1002/advs.78529

Hi-Cstatistical model

𝕏 PostBluesky

GenomicsGenome ResearchPeer-reviewedJul 1, 2022

Cell cycle arrest explained the observed bulk 3D genomic alterations in response to long term heat shock for mammalian cells

Bingxiang Xu, Xiaomeng Gao, Xiaoli Li…·Zhihua Zhang

The paper shows that long-term heat shock causes chromatin conformation changes in K562 cells due to cell cycle arrest, not chromatin accessibility changes.

7 citations

humanHi-C

𝕏 PostBluesky

Molecular BiologybioRxivPreprintSep 25, 2020

WSB1 Regulates c-Myc Expression Through β-catenin Signaling and Forms a Feedforward Circuit Promoting the Development of Cancer.

Xiaomeng Gao, Yanling Gong, Jieqiong You…·Ji Cao

This study identifies a feedforward circuit between WSB1 and c-Myc that promotes cancer development through β-catenin signaling, suggesting a potential therapeutic target.

DOI 10.1101/2020.09.25.312678

humanstatistical model

𝕏 PostBluesky