Author

Sophia G. Zebell

Howard Hughes Medical InstituteORCID 0000-0003-1854-6389Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Plant Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Zachary B. LippmaniD· 3 shared Blaine FitzgeraldiD· 2 shared Anat HendelmaniD· 1 shared Brooke M. SemaniD· 1 shared Camila Pinto da CunhaiD· 1 shared Carlos Martí‐GómeziD· 1 shared Danielle CireniD· 1 shared David M. McCandlishiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersPlant Biology

Zachary B. LippmanORCID

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3 papers

Recent·Most cited

Plant BiologyMolecular Biology and EvolutionPeer-reviewedOct 29, 2025

Pan-angiosperm analysis of the CLE signaling peptide family unveils paths, patterns, and predictions of paralog diversification

Iacopo Gentile, Miguel Santo Domingo, Sophia G. Zebell…·Zachary B. Lippman

The paper analyzes the CLE signaling peptide family across 2,000 angiosperm genomes to uncover evolutionary patterns and predict paralog diversification, revealing functional redundancies and regulatory mechanisms.

6 citations

plant (other)proteomics

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Plant BiologyNaturePeer-reviewedJul 9, 2025

Cryptic variation fuels plant phenotypic change through hierarchical epistasis

Sophia G. Zebell, Carlos Martí‐Gómez, Blaine Fitzgerald…·Zachary B. Lippman

The paper identifies cryptic genetic variants in tomato that drive phenotypic change through hierarchical epistasis in a gene regulatory network.

25 citationstop 1%

plant (other)DNA methylation

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GeneticsPLoS GeneticsPeer-reviewedMar 4, 2024

Extreme restructuring of cis-regulatory regions controlling a deeply conserved plant stem cell regulator

Danielle Ciren, Sophia G. Zebell, Zachary B. Lippman

The paper investigates cis-regulatory divergence in the CLV3 gene across Arabidopsis and tomato, revealing distinct regulatory strategies and lineage-specific functional redundancy.

27 citationstop 3%

Arabidopsisplant (other)

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