Author

Lingfang Shi

Stanford MedicineORCID 0000-0003-1874-7420Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Neuroscience· 3 Genetics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Peter N. KaoiD· 4 shared Ting-Hsuan WuiD· 4 shared William T. ClusiniD· 3 shared Abby L. CheniD· 2 shared Jessika AdrianiD· 1 shared Michael P. SnyderiD· 1 shared Minyi ShiiD· 1 shared Ramesh V. NairiD· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersNeuroscience

Peter N. KaoORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

NeurosciencebioRxivPreprintMay 10, 2022

Calcium-activated big conductance (BK) potassium channels traffic through nuclear envelopes into kinocilia in skate electrosensory cells

Abby L. Chen, Ting-Hsuan Wu, Lingfang Shi…·Peter N. Kao

The paper identifies a bipartite nuclear localization signal in skate BK channels that regulates their trafficking into nuclei and kinocilia.

1 citation

multiple speciesexperimental assay

𝕏 PostBluesky

NeurosciencebioRxivPreprintJan 27, 2020

Nuclear localization of calcium-activated BK channels in skate ampullary electroreceptors

Abby L. Chen, Ting-Hsuan Wu, Lingfang Shi…·Peter N. Kao

The paper investigates BK channel localization in skate electroreceptors, finding nuclear localization via an alternatively spliced NLS and showing its regulation by splicing or phosphorylation.

2 citations

proteomicsstatistical model

𝕏 PostBluesky

NeuroscienceGenePeer-reviewedJul 18, 2019

Further studies of ion channels in the electroreceptor of the skate through deep sequencing, cloning and cross species comparisons.

William T. Clusin, Ting-Hsuan Wu, Lingfang Shi, Peter N. Kao

The paper identifies and characterizes new ion channel subunits in skate electroreceptors through RNA-seq, cloning, and cross-species comparisons, revealing potential roles in generating fast oscillations.

6 citations

ratbulk RNA-seq

𝕏 PostBluesky

GeneticsPLoS ONEPeer-reviewedMar 28, 2018

NF90/ILF3 is a transcription factor that promotes proliferation over differentiation by hierarchical regulation in K562 erythroleukemia cells

Ting-Hsuan Wu, Lingfang Shi, Jessika Adrian…·Peter N. Kao

This study identifies NF90/ILF3 as a transcription factor that promotes proliferation over differentiation in K562 cells by hierarchically regulating key transcription factors.

33 citations

𝕏 PostBluesky