Author

Mahmoud Ghandi

Broad InstituteORCID 0000-0003-1897-2265Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Aditya S. DeshpandeiD· 1 shared Alexander DobiniD· 1 shared Andrea SboneriD· 1 shared Anne Van ArsdaleiD· 1 shared Anne‐Katrin EmdeiD· 1 shared Aviv RegeviD· 1 shared Brian J. HaasiD· 1 shared Brian J. ReidiD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Aditya S. DeshpandeORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsCell Reports MethodsPeer-reviewedMay 1, 2023

Targeted in silico characterization of fusion transcripts in tumor and normal tissues via FusionInspector

Brian J. Haas, Alexander Dobin, Mahmoud Ghandi…·Aviv Regev

FusionInspector identifies and characterizes biologically relevant fusion transcripts from RNA-seq data in tumor and normal tissues using clustering and machine learning.

38 citationstop 3%

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 12, 2019

Novel patterns of complex structural variation revealed across thousands of cancer genome graphs

Kevin Hadi, Xiaotong Yao, Julie M. Behr…·Marcin B. Imielinski

The paper identifies three novel complex structural variation patterns in cancer genomes using genome graph analysis across 2,833 tumor WGS.

14 citations

humanwhole-genome sequencing

𝕏 PostBluesky