Author

Oleksandr M. Maistrenko

European Molecular Biology LaboratoryORCID 0000-0003-1961-7548Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 2 Microbiology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 4 Research Focus:database / resource· 2 Assay:metagenomics· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Organism:Drosophila· 1 Approach:experimental assay· 1

Frequent Co-Authors

Peer Bork BiD· 3 shared Thomas SchmidtiD· 3 shared Anthony FullamiD· 2 shared Daniel R. MendeiD· 2 shared Ece KartaliD· 2 shared Luis Pedro CoelhoiD· 2 shared Alan O. BerglandiD· 1 shared Aleksandra PatenkovićiD· 1 shared

Activity by Year

2020-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

Peer Bork BORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

MicrobiologyNucleic Acids ResearchPeer-reviewedOct 31, 2025

✦ In-depth digest

Metalog: curated and harmonised contextual data for global metagenomics samples

Michael Kuhn, Thomas Schmidt, Pamela Ferretti…·Peer Bork B

Metalog manually curates and harmonises contextual metadata for 110,733 metagenomic samples from humans, animals, ocean water and other environments, linked to taxonomic profiles and SPIRE genomes.

8 citations

humanmultiple species

𝕏 PostBluesky

MicrobiologybioRxivPreprintJun 26, 2025

Hidden but discoverable diversity in the global microbiome

V. K., Oleksandr M. Maistrenko, Anthony Fullam…·Thomas Schmidt

The paper quantifies discoverable bacterial and archaeal diversity in metagenomes, finding many novel phyla and genera hidden in current data.

5 citations

metagenomicsstatistical model

𝕏 PostBluesky

GenomicsMolecular Biology and EvolutionPeer-reviewedSep 1, 2021

Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource

Martin Kapun, Joaquin C. B. Nunez, María Bogaerts-Márquez…·Alan O. Bergland

The paper develops a bioinformatics pipeline to integrate Drosophila melanogaster genomic data from diverse sources, creating a large dataset called DEST for population genetics analysis.

72 citationstop 2%

Drosophilawhole-genome sequencing

𝕏 PostBluesky

GenomicsThe ISME JournalPeer-reviewedFeb 11, 2020

Disentangling the impact of environmental and phylogenetic constraints on prokaryotic strain diversity

Oleksandr M. Maistrenko, Daniel R. Mende, Mechthild Lütge…·Peer Bork B

The paper analyzes pan-genomes of 155 prokaryotic species to assess how environmental and phylogenetic factors influence strain diversity and pan-genome features.

133 citationstop 1%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky