Author

Nathan Lanclos

Lawrence Berkeley National LaboratoryORCID 0000-0003-1995-3883Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Jay D. KeaslingiD· 2 shared Aalini JiangiD· 1 shared Andre CornmaniD· 1 shared Angelica Lam· 1 shared Christopher J. PetzoldiD· 1 shared Hunter M. NisonoffiD· 1 shared Jennifer W. GiniD· 1 shared Jonathan AbrahamiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioengineering

Jay D. KeaslingORCID

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3 papers

Recent·Most cited

BioengineeringbioRxivPreprintSep 22, 2026

Generative Design of New-to-nature Biosynthetic Assembly Lines with Genomic Language Modeling

Nathan Lanclos, Kyrellos E. Ibrahim, Andre Cornman…·Yunha Hwang

This paper uses a genomic language model to design and optimize a synthetic biosynthetic pathway for producing a non-natural molecule, achieving a 9.4-fold increase in production.

DOI 10.64898/2026.09.11.750945

metagenomicsdeep learning

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GenomicsbioRxivPreprintSep 12, 2025

Evolutionary discovery and characterization of fungal transcriptional activators using active learning

Lucas M. Waldburger, Hunter M. Nisonoff, Marissa A. Zintel…·Patrick M. Shih

The paper develops ADhunter, a model to identify and quantify transcriptional activators in fungal genomes, expanding functional annotations across non-model species.

2 citations

fungi (other)protein sequence

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GenomicsbioRxivPreprintOct 15, 2022

Comparative Mutagenesis of SARS-CoV-2 Nonstructural Proteins (NSPs) Across Variants: The Case for RdRp as a Therapeutic Target

Nathan Lanclos

The paper performs a phylogenetic analysis of SARS-CoV-2 replicase components across variants to assess RdRp as a therapeutic target.

DOI 10.1101/2022.10.15.512346

virusstatistical model

𝕏 PostBluesky