Author

Raphaël V U Collot

Oncode InstituteORCID 0000-0003-2080-1422Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 3 Research Focus:cell-cell communication· 2 Approach:deep learning· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Anne C. RiosiD· 3 shared Nils BessleriD· 3 shared Anoek ZomeriD· 2 shared Cristian Ruiz-MorenoiD· 2 shared Ellen J. WehrensiD· 2 shared Hendrik G. StunnenbergiD· 2 shared María AlievaiD· 2 shared Mariëtte E.G. KranendonkiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersCancer Biology

Anne C. RiosORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintJan 25, 2026

Cancer-myeloid cell invasive program in pediatric-type diffuse high-grade glioma

Cristian Ruiz-Moreno, Raphaël V U Collot, Thijs J M van den Broek…·Hendrik G. Stunnenberg

This paper presents an integrative multimodal atlas of pediatric-type diffuse high-grade gliomas, identifying cancer-myeloid cell programs and distinct cancer cell states across multiple patients.

2 citations

humanscRNA-seq

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Cancer BiologyNature CancerPeer-reviewedJan 5, 2026

De novo H3.3K27M-altered Diffuse Midline Glioma in human brainstem organoids to dissect GD2 CAR T cell function

Nils Bessler, Amber K. L. Wezenaar, Hendrikus CR Ariese…·Anne C. Rios

This paper develops a human brainstem organoid model of H3.3K27M-altered DMG to study GD2 CAR T cell function and identify therapeutic targets.

15 citationstop 1%

humanorganoid / primary culture

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Cancer BiologyeLifePeer-reviewedOct 15, 2025

BEHAV3D Tumor Profiler to map heterogeneous cancer cell behavior in the tumor microenvironment

Emilio Rios-Jimenez, Anoek Zomer, Raphaël V U Collot…·María Alieva

BEHAV3D-TP is a computational framework for analyzing single-cell behavior in tumor microenvironments using intravital microscopy data, revealing migratory behaviors linked to specific TME components in diffuse midline glioma.

1 citation

mouseimaging

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