Author
European Institute for Systems Biology and MedicineORCID 0000-0003-2226-7411Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
Recent·Most cited
Marie Corradi, Ivo Djidrovski, Luiz Ladeira…·Marek Ostaszewski
The paper describes the development and evaluation of an agentic framework using LLMs to explore molecular interaction maps through user-driven prototyping and testing.
Anna Niarakis, Marek Ostaszewski, Alexander Mazein…·the COVID-19 Disease Map Community
The paper presents a computational framework for analyzing SARS-CoV-2-host interactions to identify drug targets and model disease mechanisms.
James P R Schofield, Fabio Strazzeri, Jeannette Bigler…·Paul J Skipp
The paper uses a discrete Morse theory clustering algorithm on a TDA network of gene expression data to identify nine molecular phenotypes associated with asthma and glucocorticoid receptor signaling differences.