Author

Huan Fan

University of Wisconsin–MadisonORCID 0000-0003-2335-5026Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Anthony R. IvesiD· 1 shared Dongsheng WeiiD· 1 shared Hemu Wang· 1 shared Jia Chang· 1 shared Jinlong BeiiD· 1 shared Jishou Ruan· 1 shared Qi ShaoiD· 1 shared Shan GaoiD· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Anthony R. IvesORCID

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2 papers

Recent·Most cited

GenomicsFrontiers in MicrobiologyPeer-reviewedApr 4, 2022

Full-length Genome of a Ogataea polymorpha strain CBS4732 ura3Δ reveals large duplicated segments in subtelomeric regions

Jia Chang, Jinlong Bei, Qi Shao…·Shan Gao

The paper reports the full-length genome of O. polymorpha HU-11/CBS4732, revealing large duplicated segments in subtelomeric regions and structural variations between CBS4732 and NCYC495.

9 citations

yeastwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsMolecular Ecology ResourcesPeer-reviewedJun 25, 2018

Reconstructing phylogeny from reduced-representation genome sequencing data without assembly or alignment

Huan Fan, Anthony R. Ives, Yann Surget‐Groba

This study applies an alignment-free method to RADseq data to reconstruct phylogeny, showing improved accuracy and lower computational costs compared to alignment-based methods.

6 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky