Author

Volker Bergen

Helmholtz MunichORCID 0000-0003-2486-1473Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:trajectory inference· 2 Organism:mouse· 1

Frequent Co-Authors

Fabian Joachim TheisiD· 2 shared Marius LangeiD· 2 shared Bernhard ReuteriD· 1 shared Dana Pe’eriD· 1 shared F. Alexander WolfiD· 1 shared Heiko LickertiD· 1 shared Herbert B. SchilleriD· 1 shared Janine Gote-SchnieringiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Fabian Joachim TheisORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedJan 13, 2022

CellRank for directed single-cell fate mapping

Marius Lange, Volker Bergen, Michal Klein…·Fabian Joachim Theis

CellRank maps cell fates in single-cell RNA sequencing data by integrating RNA velocity and trajectory inference, revealing novel regeneration trajectories in lung injury.

783 citationstop 1%

𝕏 PostBluesky

BioinformaticsNature BiotechnologyPeer-reviewedAug 3, 2020

Generalizing RNA velocity to transient cell states through dynamical modeling

Volker Bergen, Marius Lange, Stefan Peidli…·Fabian Joachim Theis

scVelo fits a likelihood-based model of full splicing kinetics, extending RNA velocity to transient cell states and adding gene-specific kinetic rates, a latent time and putative driver genes.

2,951 citationstop 1%

scRNA-seqstatistical model

𝕏 PostBluesky