Biswapriya B. Misra

TIMS-Bench evaluates three TIMS feature-finding tools using public and benchmark datasets, identifying strengths and weaknesses in feature detection and annotation.

The paper estimates the size of plant chemical space using metabolomics and literature data, suggesting it may span millions of unique compounds, most of which remain unexplored.

RPath prioritizes drugs for diseases by analyzing causal paths in knowledge graphs using drug-perturbed and disease-specific transcriptomic signatures, outperforming existing methods.

The paper develops a machine learning workflow for auto-deconvolution of GC-MS data within GNPS, enabling molecular networking and applications in breathomics and volatilome mapping.

The paper compares a GC-Orbitrap-MS with FID capabilities to traditional GC-MS for metabolomics of human serum, showing improved quantification and pathway coverage.

A short-term Western diet exposure in baboons caused long-term metabolic changes, suggesting a reset of the metabolic program.

DIMEdb provides a unified web-based database for metabolite identification in direct infusion mass spectrometry, integrating over 80,000 metabolites from multiple sources.