Zheng Zhang

NSF is required for diverse endocytic modes by promoting fusion and fission pore closure in secretory cells

This study identifies NSF's role in mediating diverse endocytic modes by promoting fusion and fission pore closure in secretory cells.

The ENCODE Imputation Challenge: A critical assessment of methods for cross-cell type imputation of epigenomic profiles

The paper evaluates 23 imputation models for cross-cell type epigenomic data, finding quality assessment challenging due to distributional shifts, data availability, and redundant metrics.

Algorithmic Learning for Auto-deconvolution of GC-MS Data to Enable Molecular Networking within GNPS.

The paper develops a machine learning workflow for auto-deconvolution of GC-MS data within GNPS, enabling molecular networking and applications in breathomics and volatilome mapping.

Can computers understand words like humans do? Comparable semantic representation in neural and computer systems

This study compares semantic representations in neural and computational systems using EEG and finds significant correlations between model outputs and early semantic processing.

Feature-based Molecular Networking in the GNPS Analysis Environment

The paper introduces FBMN, a method for improving molecular networking by enhancing quantitative analysis and isomer distinction using feature detection and alignment tools in the GNPS platform.

Prediction of antiviral drugs against African Swine Fever Viruses based on protein-protein interaction analysis

The paper predicts antiviral drugs against African Swine Fever Viruses by analyzing protein-protein interactions and identifying key host proteins as potential drug targets.

Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure

The paper describes a workflow for creating MS/MS reference spectra in the GNPS infrastructure, achieving 99.2% accurate annotation of chemical standards.

HiAlc Klebsiella pneumonia, one of potential chief culprits of non-alcoholic fatty liver disease: through generation of endogenous ethanol

This study identifies HiAlc Klebsiella pneumoniae as a contributor to non-alcoholic fatty liver disease by inducing endogenous ethanol production in mice and humans.

Specific activation of HIV-1 from monocytic reservoir cells by bromodomain inhibitor in humanized mice in vivo

This study shows that the bromodomain inhibitor I-BET151 activates HIV-1 transcription in monocytic cells but not CD4+ T cells under cART in humanized mice.