Author

Amir B. K. Foroushani

National Institutes of HealthORCID 0000-0003-2748-3009Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Bryan ChimiD· 2 shared Markus HafneriD· 2 shared Patrick T SmithiD· 2 shared Stefan Adi MuljoiD· 2 shared Ahsan PolashiD· 1 shared Albert A. AntolíniD· 1 shared Alberto CalderoneiD· 1 shared Alicia AmadoziD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMolecular Biology

Bryan ChimORCID

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3 papers

Recent·Most cited

Molecular BiologybioRxivPreprintApr 1, 2024

MATRIN3 deficiency triggers autoinflammation via cGAS-STING activation

Zohirul Islam, Ahsan Polash, Masataka Suzawa…·Stefan Adi Muljo

This study identifies MATRIN3 deficiency as a trigger for autoinflammation through cGAS-STING activation via mis-splicing of TDRD3 and R-loop formation.

7 citations

humanstatistical model

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Systems BiologyProceedings of the National Academy of SciencesPeer-reviewedOct 5, 2020

Post-transcriptional regulation of human endogenous retroviruses by RNA-Binding Motif Protein 4, RBM4

Amir B. K. Foroushani, Bryan Chim, Madeline Wong…·Stefan Adi Muljo

This study identifies RBM4 as a post-transcriptional regulator of endogenous retrovirus (ERV) expression using computational analysis and experimental validation.

22 citations

humanbulk RNA-seq

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BioinformaticsNature CommunicationsPeer-reviewedJun 17, 2019

A cancer pharmacogenomic screen powering crowd-sourced advancement of drug combination prediction

Michael P. Menden, Dennis Y.Q. Wang, Mike J. Mason…·Denis Fourches

The paper presents a large-scale cancer pharmacogenomic screen with 11,576 experiments on 910 drug combinations across 85 cancer cell lines, enabling crowd-sourced prediction of synergistic drug pairs and biomarkers.

363 citationstop 1%

humanbulk RNA-seq

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