Author

Gert Uves van Zyl

National Health Laboratory ServiceORCID 0000-0003-3021-5101Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:DNA methylation· 2 Organism:human· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Adam A. CapoferriiD· 1 shared Andrie de Vries· 1 shared Brian T. LukeiD· 1 shared Cheryl BaxteriD· 1 shared Darren Patrick MartiniD· 1 shared Derek TshiabuilaiD· 1 shared Dominique GoedhalsiD· 1 shared Eduan WilkinsoniD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperMicrobiology

Adam A. CapoferriORCID

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3 papers

Recent·Most cited

MicrobiologyVirusesPeer-reviewedJul 9, 2025

Differential HIV-1 Proviral Defects in Children vs. Adults on Antiretroviral Therapy

Jenna M. Hasson, Mary Grace Katusiime, Adam A. Capoferri…·Mary F. Kearney

The paper compares HIV-1 proviral defects in children and adults on ART, finding more deletions and defects in children, especially in env and tat regions.

2 citations

humanDNA methylation

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Genetic & Genomic MedicineInternational Journal of Molecular SciencesPeer-reviewedOct 31, 2024

An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings.

Derek Tshiabuila, Wonderful Tatenda Choga, James Emmanuel San…·Túlio de Oliveira

The paper develops an Oxford Nanopore Technology-based protocol for HBV sequencing to improve genomic surveillance in clinical settings, generating full-genome sequences and detailed intra-patient diversity data.

7 citations

long-read sequencingexperimental assay

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BioinformaticsPLoS ONEPeer-reviewedMar 5, 2019

PhyloPi: an affordable, purpose built phylogenetic pipeline for the HIV drug resistance testing facility

Phillip Armand Bester, Andrie de Vries, Stephanus Riekert…·Dominique Goedhals

PhyloPi provides an affordable phylogenetic pipeline for HIV drug resistance testing, enabling sample swap detection and genetic diversity analysis using a Raspberry Pi.

1 citation

humanDNA methylation

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