Adel T. Aref

The paper identifies a gene and protein expression signature associated with HOXB13 G84E carrier status in prostate cancer using proteogenomic analysis.

ProCanFDL uses federated deep learning to subtype cancers using proteomic data while preserving privacy, achieving performance gains over local models.

This paper introduces DeePathNet, a Transformer-based model that integrates cancer pathways with multi-omic data to improve drug response prediction and cancer classification.