Author

Matias Kaplan

Stanford UniversityORCID 0000-0003-3062-7026Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Approach:deep learning· 1

Frequent Co-Authors

Brent TownshendiD· 2 shared Adrian L. SanborniD· 1 shared Akshay Tambe· 1 shared April Schleck· 1 shared Ayah AbdeldayemiD· 1 shared Brandon AndersoniD· 1 shared Christina D. SmolkeiD· 1 shared Connor J. StephensiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Brent TownshendORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 13, 2023

ATOM-1: A Foundation Model for RNA Structure and Function Built on Chemical Mapping Data

Nicholas R. Boyd, Brandon Anderson, Brent Townshend…·Raphael J.L. Townshend

ATOM-1 is an RNA foundation model trained on chemical mapping data, enabling state-of-the-art RNA prediction tasks through small probe neural networks.

23 citations

deep learningexperimental assay

𝕏 PostBluesky

Synthetic BiologyPLoS ONEPeer-reviewedSep 15, 2022

Highly Multiplexed Selection of RNA Aptamers Against a Small Molecule Library

Brent Townshend, Matias Kaplan, Christina D. Smolke

The paper describes a method to select RNA aptamers against a large small molecule library, identifying biosensors with high sensitivity and diverse sensing patterns.

10 citations

experimental assay

𝕏 PostBluesky