Author

Ulrich Nübel

German Center for Infection ResearchORCID 0000-0003-3131-1656Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Organism:bacteria (other)· 3 Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Boyke BunkiD· 3 shared Jörg OvermanniD· 3 shared Judith BoldtiD· 2 shared Margo DiricksiD· 2 shared Matthias SteglichiD· 2 shared Rolf MülleriD· 2 shared Stefan NiemanniD· 2 shared Aileen Gollasch· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersGenomics

Boyke BunkORCID

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4 papers

Recent·Most cited

MicrobiologyAdvanced SciencePeer-reviewedAug 6, 2026

Unveiling the taxonomic diversity and unprecedented biosynthetic treasure of the phylum Myxococcota

Amay Ajaykumar Agrawal, Ronald Garcia, Guangyi Chen…·Rolf Müller

The paper presents 154 new Myxococcota genomes, expands taxonomy, and identifies novel natural products, highlighting their biosynthetic potential for drug discovery.

4 citationstop 1%

bacteria (other)whole-genome sequencing

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GenomicsNucleic Acids ResearchPeer-reviewedOct 14, 2024

EnteroBase in 2025: exploring the genomic epidemiology of bacterial pathogens

Nigel P. Dyer, Birgitta Päuker, Laura A. Baxter…·Ulrich Nübel

The paper updates the EnteroBase platform with new data and tools for genomic epidemiology of bacterial pathogens, including antimicrobial resistance detection and visualization features.

69 citationstop 1%

bacteria (other)whole-genome sequencing

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GenomicsMicrobial BiotechnologyPeer-reviewedMar 30, 2023

Bursts in biosynthetic gene cluster transcription are accompanied by surges of natural compound production in the myxobacterium Sorangium sp.

Judith Boldt, Laima Lukoševičiūtė, Chengzhang Fu…·Ulrich Nübel

The paper shows that bursts in biosynthetic gene cluster transcription in Sorangium sp. correlate with natural compound production, challenging the idea that BGCs are preferentially expressed under nutrient limitation.

11 citations

bacteria (other)bulk RNA-seq

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GenomicsNature CommunicationsPeer-reviewedApr 27, 2020

The global phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia

Matthias I. Gröschel, Conor Joseph Meehan, Ivan Barilar…·Thomas Andreas Kohl

The paper analyzes global S. maltophilia strains to show genetic diversity and intra-hospital transmission.

139 citationstop 1%

humanstatistical model

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