Author

Lee E. Korshoj

University of Colorado BoulderORCID 0000-0003-3514-1404Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Prashant NagpaliD· 1 shared Tammy KielianiD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

2 top collaborators · 0 mutual co-author links

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1 shared paperBioinformatics

Prashant NagpalORCID

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2 papers

Recent·Most cited

MicrobiologyNature CommunicationsPeer-reviewedNov 23, 2024

Bacterial single-cell RNA sequencing captures biofilm transcriptional heterogeneity and differential responses to immune pressure

Lee E. Korshoj, Tammy Kielian

This study develops BaSSSh-seq, a bacterial single-cell RNA sequencing method, to analyze transcriptional heterogeneity and immune responses in biofilms.

55 citationstop 2%

bacteria (other)scRNA-seq

𝕏 PostBluesky

BioinformaticsComputers in Biology and MedicinePeer-reviewedMay 30, 2019

BOCS: DNA k-mer content and scoring for rapid genetic biomarker identification at low coverage

Lee E. Korshoj, Prashant Nagpal

BOCS identifies genetic biomarkers using k-mer content analysis at low sequencing coverage with high accuracy for antibiotic resistance and cancer genes.

6 citations

DNA methylationwhole-genome sequencing

𝕏 PostBluesky