Author

Alexandra P. Turner

University of PennsylvaniaORCID 0000-0003-3577-8587Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Divij MathewiD· 2 shared E. John WherryiD· 2 shared Aalim M. WeljieiD· 1 shared Ai Wen TaniD· 1 shared Ajinkya PattekariD· 1 shared Alessandra Soares SchanoskiiD· 1 shared Allison R. GreenplateiD· 1 shared Andrew G. LetiziaiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Divij MathewORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

BioinformaticsCell Reports MedicinePeer-reviewedNov 1, 2024

Cytometry Masked Autoencoder: An Accurate and Interpretable Automated Immunophenotyper

Jaesik Kim, Matei Ionita, Matthew Lee…·Dokyoon Kim

The paper introduces cyMAE, a masked autoencoder for automated immunophenotyping, showing it improves accuracy and interpretability over manual methods in cytometry data analysis.

9 citations

humanbulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintJun 2, 2023

Deep Phenotyping of the Lipidomic Response in COVID and non-COVID Sepsis

Hu Meng, Arjun Sengupta, Emanuela Ricciotti…·Garret A. FitzGerald

The paper identifies lipidomic biomarkers and therapeutic targets in sepsis patients, including those with COVID-19, and develops an interactive network analysis tool for multiomic data exploration.

5 citations

humanmetabolomics

𝕏 PostBluesky