Author
Ken Nakae
Kyoto UniversityORCID 0000-0003-4183-1532Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2019-2026 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 45 mutual co-author links10 papers
Recent·Most cited
- Animal Behavior & CognitionbioRxivPreprintDOI 10.64898/2026.06.07.730757
- NeurosciencebioRxivPreprint
The Brain/MINDS 3D Digital Marmoset Brain Atlas Version 2.0: Population-Based Cortical Parcellations With Multi-Modal Standard Templates
Rui Gong, Noritaka Ichinohe, Hiroshi Abe…·Alexander Woodward
The paper introduces BMA2.0, a population-based 3D marmoset brain atlas with multi-modal templates for improved cortical and subcortical parcellation and integration of multimodal data.
DOI 10.1101/2025.08.28.672987 - NeurosciencebioRxivPreprint
A multimodal dataset linking wide-field calcium imaging to behavior changes in mice during an operant lever-pull task
DOI 10.1101/2025.02.03.631599 - NeurosciencebioRxivPreprint
Epileptic responses in marmosets induced by knockdown of CREB Regulated Transcription Coactivator 1 (CRTC1)
Yuki Nakagami, Misako Komatsu, Ken Nakae…·Tetsuo Yamamori
This study shows that CRTC1 knockdown in marmosets leads to epileptic responses and abnormal cFOS expression, with associated neural activity changes and lesions.
DOI 10.1101/2023.09.22.558929 - NeuroscienceNeuronPeer-reviewed
Local and long-distance organization of prefrontal cortex circuits in the marmoset brain
Akiya Watakabe, Henrik Skibbe, Ken Nakae…·Tetsuo Yamamori
This study maps prefrontal cortex circuits in marmosets, revealing distinct local and long-distance projection patterns and their implications for primate brain organization.
64 citationstop 1% - NeuroscienceScientific DataPeer-reviewed
Multi-modal brain magnetic resonance imaging database covering marmosets with a wide age range
Junichi Hata, Ken Nakae, Hiromichi Tsukada…·Hideyuki Okano
The paper presents a large-scale MRI database of marmosets across a wide age range to study brain aging and its factors.
- NeurosciencebioRxivPreprint
The Brain/MINDS Marmoset Connectivity Atlas: Exploring bidirectional tracing and tractography in the same stereotaxic space
Henrik Skibbe, Muhammad Febrian Rachmadi, Ken Nakae…·Akiya Watakabe
The paper introduces the Brain/MINDS Marmoset Connectivity Atlas, providing a resource for exploring neuronal tracer data and tractography in a common stereotaxic space.
5 citations - GenomicsNature CommunicationsPeer-reviewed
Model-based prediction of spatial gene expression via generative linear mapping
Yasushi Okochi, Shunta Sakaguchi, Ken Nakae…·Honda Naoki
Perler predicts spatial gene expression from scRNA-seq data by integrating with in situ hybridization data using a generative linear model, achieving accurate and interpretable results across multiple tissues.
23 citations - NeuroscienceBrain Structure and FunctionPeer-reviewed
The NanoZoomer Connectomics Pipeline for Tracer Injection Studies of the Marmoset Brain
Alexander Woodward, Rui Gong, Hiroshi Abe…·Noritaka Ichinohe
This paper describes a pipeline for processing tracer injection data in marmoset brains, enabling normalization into a common 3D space for connectomics studies.
14 citations - NeuroscienceJournal of NeurogeneticsPeer-reviewed
System level analyses of motor-related neural activities in larval Drosophila
Youngteak Yoon, Jeonghyuk Park, Atsushi Taniguchi…·Akinao Nose
The paper analyzes motor-related neural activity in larval Drosophila during fictive locomotion, identifying neurons biased toward forward or backward movement.
6 citations