Author

Saqib Rizvi

University of VirginiaORCID 0000-0003-4223-318XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:database / resource· 2 Organism:human· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Kristen M. NaegleiD· 3 shared Alekhya Abhiram KandooriD· 2 shared Logan Campbell· 2 shared Ben T. JordaniD· 1 shared Bingjie XueiD· 1 shared Gabrielle Martinez· 1 shared Julianna M. Hitchcock· 1 shared Sam Crowl· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 21 mutual co-author links

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3 shared papersSystems Biology

Kristen M. NaegleORCID

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3 papers

Recent·Most cited

Systems BiologybioRxivPreprintOct 5, 2026

ProteomeScout v4: An open-source, harmonized, ecosystem for post-translational modifications

Sam Crowl, Saqib Rizvi, Logan Campbell…·Kristen M. Naegle

ProteomeScout v4 provides an open-source ecosystem for aggregating and harmonizing post-translational modification data with web and code-based access tools.

DOI 10.64898/2026.10.01.756115

proteomicsstatistical model

𝕏 PostBluesky

Systems BiologybioRxivPreprintJul 18, 2024

CoDIAC: A comprehensive approach for interaction analysis reveals novel insights into SH2 domain function and regulation

Alekhya Abhiram Kandoor, Gabrielle Martinez, Julianna M. Hitchcock…·Kristen M. Naegle

The paper develops CoDIAC, a tool for analyzing domain interfaces, revealing new insights into SH2 domain function and regulation through phosphorylation and acetylation.

3 citations

humanprotein structure

𝕏 PostBluesky

Molecular BiologybioRxivPreprintAug 10, 2020

KinPred: A unified and sustainable approach for harnessing proteome-level human kinase-substrate predictions

Bingjie Xue, Ben T. Jordan, Saqib Rizvi, Kristen M. Naegle

KinPred unifies and sustains kinase-substrate predictions by standardizing reference proteomes, mapping substrates and kinases, and filtering for the human phosphoproteome.

1 citation

humanproteomics

𝕏 PostBluesky