Author

Guillermina Hernandez‐Raquet

Centre National de la Recherche ScientifiqueORCID 0000-0003-4465-4607Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:genome assembly· 1 Assay:Hi-C· 1 Organism:human· 1

Frequent Co-Authors

Adèle LazukaiD· 1 shared Alessandro TancaiD· 1 shared Alexis MergeziD· 1 shared Angeline Rizzo· 1 shared Benoit Josef KunathiD· 1 shared Bernard HenrissatiD· 1 shared Christophe KloppiD· 1 shared Claire DumoniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperBiochemistry

Adèle LazukaORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 21, 2026

SPA-C: an hybrid tool to accurately scaffold genomes using Hi-C and Deep-Learning

Alexis Mergez, Raphaël Mourad, Guillermina Hernandez‐Raquet, Matthias Zytnicki

SPA-C improves genome scaffolding by combining Hi-C data with a CNN and graph-solving algorithm, outperforming existing methods on benchmark genomes.

DOI 10.64898/2026.06.16.732382

Hi-Cdeep learning

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MicrobiologyMicrobiomePeer-reviewedNov 27, 2025

Critical Assessment of MetaProteome Investigation 2 (CAMPI-2): Multi-laboratory assessment of sample processing methods to stabilize fecal microbiome for functional analysis

Alessandro Tanca, Kay Schallert, Lucia Grenga…·Sergio Uzzau

CAMPI-2 evaluates five fecal sample stabilization methods for metaproteomics, finding one commercial device offers the best reproducibility and stability during room-temperature storage.

2 citations

humanmetagenomics

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BiochemistrybioRxivPreprintMar 15, 2024

Functional exploration of in vivo and in vitro lignocellulose-fed rumen bacterial microbiomes reveals novel enzymes involved in polysaccharide breakdown

Lisa Ufarté, Élisabeth Laville, Adèle Lazuka…·Gabrielle Potocki-Véronèse

The paper identifies novel enzymes from rumen microbiomes that break down plant cell walls using a high-throughput metagenomic approach.

2 citations

metagenomicsexperimental assay

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