Salvatore Alaimo

geneslator provides a unified R package for gene identifier conversion, ortholog mapping, and pathway annotation across eight species, improving data integration and cross-species analysis.

This study uses gene-gene interaction networks from RNA-Seq data to improve prediction of treatment response in rheumatoid arthritis.

PHENSIM simulates cell phenotype changes due to biomolecule activation/inhibition using signaling pathways, showing high prediction accuracy through benchmarking.