Author

Yves J. Martin des Taillades

Stanford UniversityORCID 0000-0003-4954-612XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Approach:deep learning· 1 Organism:human· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1 Assay:structural biology· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Matthew F. AllaniD· 3 shared Silvi RouskiniD· 3 shared Albéric A. de LajarteiD· 2 shared Casper L’Esperance-KerckhoffiD· 2 shared Federico Fuchs WightmaniD· 2 shared Justin ArudaiD· 2 shared Scott L. GroteiD· 2 shared Alex Kashi· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMolecular Biology

Matthew F. AllanORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BiochemistryScience AdvancesPeer-reviewedFeb 25, 2026

Diverse Database and Machine Learning Model to narrow the generalization gap in RNA structure prediction

Albéric A. de Lajarte, Yves J. Martin des Taillades, Justin Aruda…·Silvi Rouskin

The paper introduces a diverse RNA structure database and a deep learning model, eFold, which improves RNA secondary structure prediction by emphasizing structural diversity over database size.

18 citationstop 1%

humanstructural biology

𝕏 PostBluesky

Molecular BiologyNucleic Acids ResearchPeer-reviewedJul 14, 2025

SEISMICgraph: a web-based tool for RNA structure data visualization

Federico Fuchs Wightman, Grant Yang, Yves J. Martin des Taillades…·Lauren D. Hagler

SEISMICgraph is a web-based tool for visualizing RNA structure data from chemical probing experiments, enabling comparison across sequences and conditions.

4 citations

experimental assaysoftware / tool

𝕏 PostBluesky

Molecular BiologybioRxivPreprintApr 29, 2024

Discovery and Quantification of Long-Range RNA Base Pairs in Coronavirus Genomes with SEARCH-MaP and SEISMIC-RNA

Matthew F. Allan, Justin Aruda, Jesse S. Plung…·Silvi Rouskin

The paper introduces SEARCH-MaP and SEISMIC-RNA to discover and quantify long-range RNA base pairs in coronaviruses, revealing their role in ribosomal frameshifting.

16 citations

experimental assay

𝕏 PostBluesky