Author

Catherine R. Zhang

Stanford UniversityORCID 0009-0001-1256-3834Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:perturbation response prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Michael Cory BassikiD· 2 shared Mingxin Gu· 2 shared Adi Xiyal MukundiD· 1 shared Ahmad S. KhaliliD· 1 shared Alun Vaughan-JacksoniD· 1 shared Anshul Bharat KundajeiD· 1 shared AradhanaiD· 1 shared Christine Y. YehiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

Michael Cory BassikORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintAug 18, 2025

Cancer cell phagocytosis induces an anti-inflammatory gene regulatory program in macrophages

Catherine R. Zhang, Lei Xiong, Mingxin Gu…·Michael Cory Bassik

This study shows that cancer cell phagocytosis by macrophages induces an anti-inflammatory gene regulatory program, promoting immunosuppression and tumor growth.

3 citations

humanbulk RNA-seq

𝕏 PostBluesky

Systems BiologyNature BiotechnologyPeer-reviewedNov 1, 2024

Development of compact transcriptional effectors using high-throughput measurements in diverse contexts

Josh Tycko, Mike V. Van, Aradhana…·Michael Cory Bassik

The paper develops HT-recruit to measure transcriptional effector function across contexts and identifies context-dependent effectors for CRISPR-based transcription control.

57 citationstop 1%

humanCRISPR screen

𝕏 PostBluesky