Author

Themistoklis Vasilopoulos

Rutgers, The State University of New JerseyORCID 0009-0001-1962-5073Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 2 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 3 Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Assay:ChIP-seq· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:cell type annotation· 1

Frequent Co-Authors

Ricardo Iván Martínez‐ZamudioiD· 3 shared Utz HerbigiD· 3 shared Elizabeth Akbulut· 2 shared Paolo S. TuranoiD· 2 shared Patricia A. Fitzgerald-BocarslyiD· 2 shared Alketa Stefa· 1 shared Grégory R G Doré· 1 shared Hannah K. DewaldiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Ricardo Iván Martínez‐ZamudioORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Systems BiologybioRxivPreprintSep 13, 2026

A transitional senescence program drives inflammatory monocyte state expansion in aging humans

Themistoklis Vasilopoulos, Paolo S. Turano, Luis Garza‐Martinez…·Ricardo Iván Martínez‐Zamudio

The paper identifies a senescence-like transitional state in aging human monocytes driven by AP-1, leading to inflammatory monocyte expansion and systemic inflammation.

DOI 10.64898/2026.09.09.750459

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsCell ReportsPeer-reviewedDec 31, 2025

Epigenetic mechanisms regulating CD8+ T cell senescence in aging humans

Paolo S. Turano, Elizabeth Akbulut, Hannah K. Dewald…·Ricardo Iván Martínez‐Zamudio

This study identifies epigenetic regulators of CD8+ T cell senescence in aging humans using multiomic profiling and shows their relevance to disease progression.

16 citationstop 3%

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsCell GenomicsPeer-reviewedApr 1, 2023

Escape From Oncogene-Induced Senescence is Controlled by POU2F2 and Memorized by Chromatin Scars

Ricardo Iván Martínez‐Zamudio, Alketa Stefa, José Américo Nabuco Leva Ferreira de Freitas…·Utz Herbig

The paper identifies POU2F2 and chromatin scars as mechanisms enabling escape from oncogene-induced senescence and their potential as biomarkers in colorectal cancer.

44 citationstop 2%

humanDNA methylation

𝕏 PostBluesky