Author

Sebastian Persson

Chalmers University of TechnologyORCID 0009-0001-2304-4263Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 3 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Organism:yeast· 2 Approach:Bayesian inference· 1 Approach:benchmark study· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Marija CvijovićiD· 4 shared Jan HasenaueriD· 2 shared Clemens KreutziD· 1 shared Damiano OgnissantiiD· 1 shared Daniel WeindliD· 1 shared Dilan PathiranaiD· 1 shared Domagoj DorešićiD· 1 shared Fabian FröhlichiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersSystems Biology

Marija CvijovićORCID

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4 papers

Recent·Most cited

Systems BiologyPLoS Computational BiologyPeer-reviewedSep 30, 2026

PEtab Select: specification standard and supporting software for automated model selection

Dilan Pathirana, Frank Bergmann, Domagoj Dorešić…·with the PEtab Select community

PEtab Select provides a standardized format and software for automated model selection in systems biology, supporting diverse modeling frameworks and enabling efficient evaluation of large model spaces.

3 citationstop 3%

statistical modelbenchmark study

𝕏 PostBluesky

Cell BiologyThe EMBO JournalPeer-reviewedOct 2, 2025

The origin of septin ring size control in budding yeast

Igor V Kukhtevich, Sebastian Persson, Francesco Padovani…·Kurt M. Schmoller

This study investigates how septin ring size scales with cell size in budding yeast by combining computational modeling, live-cell imaging, and genetic experiments.

2 citations

yeastfluorescence / live-cell microscopy

𝕏 PostBluesky

Systems BiologyBioinformaticsPeer-reviewedSep 1, 2025

PEtab.jl: Advancing the Efficiency and Utility of Dynamic Modelling

Sebastian Persson, Fabian Fröhlich, Stephan Grein…·Marija Cvijović

PEtab.jl improves dynamic modelling efficiency by comparing ODE solvers and parameter estimation methods, showing faster performance than pyPESTO for medium-sized models.

8 citations

statistical modelbenchmarking

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Systems BiologyPLoS Computational BiologyPeer-reviewedMay 19, 2022

PEPSDI: Scalable and flexible inference framework for stochastic dynamic single-cell models

Sebastian Persson, Niek Welkenhuysen, Sviatlana Shashkova…·Marija Cvijović

PEPSDI infers model parameters from time-lapse data to identify extrinsic noise sources in yeast nutrient sensing pathways.

15 citations

yeastscRNA-seq

𝕏 PostBluesky