Author

Zhiyi Li

Scripps Research InstituteORCID 0009-0001-2418-046XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Zhiyi Li1 paper · Massachusetts Institute of Technology

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:protein design· 1 Assay:proteomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ahmed H. BadraniD· 1 shared Alan CostelloiD· 1 shared Alexander A. PetersoniD· 1 shared David L. LansteriD· 1 shared Gavriela D. CarveriD· 1 shared Layne T. Watson· 1 shared Liqing ZhangiD· 1 shared Mohammad Shabbir HasaniD· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperSynthetic Biology

Ahmed H. BadranORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Synthetic BiologyNature BiotechnologyPeer-reviewedSep 11, 2024

Efficient Genetic Code Expansion Without Host Genome Modifications

Alan Costello, Alexander A. Peterson, David L. Lanster…·Ahmed H. Badran

This paper develops a plasmid-based codon compression strategy to improve non-canonical amino acid incorporation in E. coli, enabling the creation of new-to-nature peptides with multiple ncAAs.

28 citationstop 5%

E. coliproteomics

𝕏 PostBluesky

BioinformaticsScientific ReportsPeer-reviewedOct 20, 2017

UPS-indel: A Universal Positioning System For Indels

Mohammad Shabbir Hasan, Xiaowei Wu, Layne T. Watson…·Liqing Zhang

UPS-indel identifies and resolves redundant indels in genomic databases, improving data consistency and comparison across variant calling tools.

10 citations

humanwhole-genome sequencing

𝕏 PostBluesky