Imputed graph-genotyped structural variants identify regulatory haplotypes associated with gene expression in Atlantic salmon
Maëlys Chapis, Domniki Manousi, Célian Diblasi…·Marie Saitou
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Norwegian University of Life SciencesORCID 0009-0001-6548-0661Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
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Maëlys Chapis, Domniki Manousi, Célian Diblasi…·Marie Saitou
Célian Diblasi, Jun Soung Kwak, Domniki Manousi…·Marie Saitou
The paper investigates the evolutionary origins of shared structural variants across Atlantic salmon lineages, finding they result from ancient persistence, recurrent mutation, and lineage-specific frequency changes.
This study evaluates a course redesign in a graduate genomics course, finding improved perceived navigability but persistent challenges in course coherence.
Célian Diblasi, Domniki Manousi, David G. Hazlerigg…·Marie Saitou
The paper analyzes eQTL data in Atlantic salmon to show long-term dosage balance maintenance after a 100 million-year-old genome duplication.
Sonja Trebing, Matthias Freund, Anda L. Iosip…·Ines Kreuzer
This study identifies impaired cell wall biomechanics as the cause of delayed trap closure in the Venus flytrap mutant DYSCALCULIA, linking mechanosensing and Ca2+ signaling to trap kinetics.
Marie Saitou, Arturo Vera-Ponce de León, Akira Harding…·Lars Gustav Snipen
The paper analyzes unmapped reads from Atlantic salmon RNA-seq to detect microbial signals, finding tank-specific effects but no survival or sex associations.
Pauline Buso, Célian Diblasi, Domniki Manousi…·Marie Saitou
The paper examines genomic responses to domestication in Atlantic salmon, revealing parallel selection on MHC genes and WGD-derived homeologous regions.