Domniki Manousi

The paper investigates the evolutionary origins of shared structural variants across Atlantic salmon lineages, finding they result from ancient persistence, recurrent mutation, and lineage-specific frequency changes.

The paper analyzes eQTL data in Atlantic salmon to show long-term dosage balance maintenance after a 100 million-year-old genome duplication.

This study examines the evolution of gig immune genes in teleosts, focusing on Atlantic salmon, revealing distinct evolutionary trajectories and regulatory mechanisms.

The paper identifies a major locus on chromosome 14 associated with gill gene expression and somatic growth in Atlantic salmon during smoltification.

The paper analyzes unmapped reads from Atlantic salmon RNA-seq to detect microbial signals, finding tank-specific effects but no survival or sex associations.

The paper develops gene expression-based predictive models for survival and growth in seawater using gill transcriptomes of Atlantic salmon, finding photoperiod-sensitive genes are more important than previously thought sodium pump genes.

The paper examines genomic responses to domestication in Atlantic salmon, revealing parallel selection on MHC genes and WGD-derived homeologous regions.