Author

Xiaoqian Huang

Soochow UniversityORCID 0009-0002-1643-2038Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Jinqi Yuan· 2 shared Jialuo Ye· 1 shared Junpeng ZhouiD· 1 shared Keyao Zhu· 1 shared Shen YangiD· 1 shared Wei Li· 1 shared Yue YiniD· 1 shared Yumei LiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Jinqi Yuan

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 18, 2026

Pan-cancer nucleosome landscapes reveal tumor heterogeneity and inform cell-free DNA-based detection

Shen Yang, Jialuo Ye, Jinqi Yuan…·Yumei Li

The paper characterizes nucleosome organization across 23 cancer types using ATAC-seq and shows its utility for cancer classification and detection using cell-free DNA.

DOI 10.64898/2026.10.12.758417

humanATAC-seq

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BioinformaticsbioRxivPreprintJun 9, 2025

cfDNAanalyzer: a comprehensive toolkit for analyzing cell-free DNA genomic sequencing data in liquid biopsy

Junpeng Zhou, Keyao Zhu, Xiaoqian Huang…·Yumei Li

cfDNAanalyzer provides a toolkit for analyzing cfDNA data to enable disease detection through machine learning models.

1 citation

whole-genome sequencingwhole-exome sequencing

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