Author

Nicholas Pucci

Amsterdam University Medical CentersORCID 0009-0002-2668-6330Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Daniel R. MendeiD· 3 shared Aalt D. J. van DijkiD· 1 shared Alejandro Sanchez-Cano· 1 shared Amke Marije KaaniD· 1 shared Arnoud P. VerhoeffiD· 1 shared Bertha T. Nzangwa· 1 shared Bruno SovraniD· 1 shared Caroline Cleopatra ChisengaiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersMicrobiology

Daniel R. MendeORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintApr 29, 2026

A bifidobacterial enzyme orchestrates ecology and function of infant gut bacterial community

Yangwei Shan, Nicholas Pucci, Coen Berns…·Jianbo Zhang

This study shows how a single bacterial enzyme, D4BMY8, influences the composition and metabolism of an infant gut microbial community through its preference for the HMO lacto-N-tetraose.

DOI 10.64898/2026.04.28.718440

humanproteomics

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GenomicsPLoS Computational BiologyPeer-reviewedMar 5, 2026

Unique ecology of co-occurring functionally and phylogenetically undescribed species in the infant oral microbiome

Nicholas Pucci, Amke Marije Kaan, Joanne K. Ujčič-Voortman…·Daniel R. Mende

The paper identifies two previously unknown oral bacteria in infants and shows they co-occur and exchange nutrients through metabolic interactions.

1 citation

humanmetagenomics

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MicrobiologybioRxivPreprintOct 29, 2025

Microbiota-derived indole metabolites inhibit rotavirus infection in vitro and in vivo and in human infants

Nurul I. Wirusanti, Yannick van Schajik, Jongchan Kim…·Vanessa Harris

This study shows microbiota-derived indole metabolites inhibit rotavirus infection in human infants and animal models through the AhR pathway.

1 citation

humanmouse

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