Author

Kostianna Sereti

GenentechORCID 0009-0002-3452-9431Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:long-read sequencing· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1

Frequent Co-Authors

Ashley ByrneiD· 2 shared Daniel LeiD· 2 shared Timothy Sterne-WeileriD· 2 shared William StephensoniD· 2 shared Alexander Ritter· 1 shared Ana Xavier‐MagalhãesiD· 1 shared Hari MenoniD· 1 shared Jessica M. Lund· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Ashley ByrneORCID

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2 papers

Recent·Most cited

Single-cell long-read targeted sequencing reveals transcriptional variation in ovarian cancer

Ashley Byrne, Daniel Le, Kostianna Sereti, Hari Menon, Samir Vaidya, Neha Patel, Jessica M. Lund, Ana Xavier‐Magalhães, Minyi Shi, Yuxin Liang, Timothy Sterne-Weiler, Zora D. Modrusan, William Stephenson

This study introduces scTaILoR-seq, a long-read targeted RNA sequencing method, to enhance single-cell transcriptome analysis and identify isoform variation and SNV associations in ovarian cancer.

Nature Communications · Aug 12, 2024Peer-reviewedGenomics

Accurate long-read transcript discovery and quantification at single-cell resolution with Isosceles

Michał Kabza, Alexander Ritter, Ashley Byrne, Kostianna Sereti, Daniel Le, William Stephenson, Timothy Sterne-Weiler

Isosceles improves isoform detection and quantification accuracy in single-cell and bulk RNA-seq data using nanopore long-reads.

bioRxiv · Nov 30, 2023 · PreprintBioinformatics