Author

Fabiola Pedrini

University of PaduaORCID 0009-0002-7302-0486Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Anna CorràiD· 1 shared Chiara RomualdiiD· 1 shared Davide RissoiD· 1 shared Enrica CaluraiD· 1 shared Giovanni EspositoiD· 1 shared Laura MasattiiD· 1 shared Paolo G. V. MartiniiD· 1 shared Stefania PirrottaiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Anna CorràORCID

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1 paper

Recent·Most cited

signifinder enables the identification of tumor cell states and cancer expression signatures in bulk, single-cell and spatial transcriptomic data

Stefania Pirrotta, Laura Masatti, Anna Corrà, Fabiola Pedrini, Giovanni Esposito, Paolo G. V. Martini, Davide Risso, Chiara Romualdi, Enrica Calura

signifinder is an R package that collects, implements, and compares cancer-related gene expression signatures across bulk, single-cell, and spatial transcriptomic data to improve reproducibility and usability.

bioRxiv · Mar 7, 2023 · PreprintBioinformatics