Author

Madison James Yang

Stanford MedicineORCID 0009-0003-0067-9877Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Birgitt SchüleiD· 2 shared Faria ZafariD· 2 shared Kamilla SedoviD· 2 shared Leila NamvariD· 1 shared Max Yang CheniD· 1 shared Rebecca HermosilloiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

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6 top collaborators · 13 mutual co-author links

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2 shared papersGenomics

Birgitt SchüleORCID

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2 papers

Recent·Most cited

GenomicsBMC GenomicsPeer-reviewedOct 1, 2026

Optical genome mapping identifies source-associated structural variant differences across early-passage human iPSCs

Leila Namvar, Kamilla Sedov, Madison James Yang…·Birgitt Schüle

This study uses optical genome mapping to compare structural variant profiles of iPSCs derived from different somatic cell sources, finding differences in SV burden and types between PBMC- and fibroblast-derived clones.

DOI 10.1186/s12864-026-13395-2

humanwhole-genome sequencing

𝕏 PostBluesky

Cell BiologybioRxivPreprintOct 17, 2024

Optical Genome Mapping of the human reference iPSC line KOLF2.1J reveals new smaller structural variants in neurodevelopmental genes

Madison James Yang, Kamilla Sedov, Max Yang Chen…·Birgitt Schüle

The paper uses optical genome mapping to identify new smaller structural variants in the KOLF2.1J iPSC line, affecting genes relevant to neurodevelopment.

DOI 10.1101/2024.10.17.618968

humanwhole-genome sequencing

𝕏 PostBluesky