Author

Erik A. Ehlers

Allen Institute for Cell ScienceORCID 0009-0003-1093-793XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Biophysics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Research Focus:cell signaling & trafficking· 1 Approach:comparative / phylogenetic analysis· 1 Assay:CRISPR screen· 1

Frequent Co-Authors

Brock RobertsiD· 3 shared Amber PhaniD· 2 shared Caroline HookwayiD· 2 shared Chamari S. WijesooriyaiD· 2 shared Chantelle L. LeveilleiD· 2 shared Clare Ruth GamliniD· 2 shared Emmanuel E. Sanchez· 2 shared Gaea Turman· 2 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersCell Biology

Brock RobertsORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BiophysicsbioRxivPreprintJul 11, 2026

Dynamics of ML-based Morphological Features Indicate a Shear Stress-Dependent Bifurcation of hiPSC-Derived Endothelial Cell States

Erin Angelini, Chantelle L. Leveille, Serge E. Parent…·Matheus Palhares Viana

The paper uses ML to analyze morphological dynamics of hiPSC-derived endothelial cells under shear stress, identifying a bifurcation between two stable cell states.

DOI 10.64898/2026.07.07.736803

humanfluorescence / live-cell microscopy

𝕏 PostBluesky

Cell BiologyNature MethodsPeer-reviewedJun 15, 2026

A human induced pluripotent stem (hiPS) cell model for the holistic study of epithelial to mesenchymal transitions (EMTs)

Caroline Hookway, Antoine Borensztejn, Leigh K. Harris…·Susanne M. Rafelski

The paper presents a hiPS cell model to study EMTs by comparing 2D and 3D cultures, measuring changes in cell function, markers, organization, and environment.

3 citationstop 4%

humanimaging

𝕏 PostBluesky

Cell BiologybioRxivPreprintMay 24, 2024

Enhanced endogenous gene tagging in human induced pluripotent stem cells via AAV6-mediated donor delivery

Erik A. Ehlers, Kyle N. Klein, Margaret A. Fuqua…·Brock Roberts

This paper develops a method to efficiently insert fluorescent tags into genes not expressed in hiPSCs using AAV6 delivery, optimized CRISPR conditions, and ddPCR/ICE to minimize INDELs and isolate tagged clones.

3 citations

humanCRISPR screen

𝕏 PostBluesky