Author

Lauren Liu

California Institute of TechnologyORCID 0009-0003-2329-1867Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Lauren Liu1 paper · University of California, San Francisco

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Lior S. PachteriD· 2 shared Páll MelstediD· 2 shared A. Sina BooeshaghiiD· 1 shared Eduardo da Veiga BeltrameiD· 1 shared Fan GaoiD· 1 shared Jase GehringiD· 1 shared Kristján Eldjárn HjörleifssoniD· 1 shared Kyung Hoi MiniD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

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10 top collaborators · 38 mutual co-author links

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2 shared papersBioinformatics

Lior S. PachterORCID

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2 papers

Recent·Most cited

BioinformaticsNature BiotechnologyPeer-reviewedApr 1, 2021

Modular and efficient pre-processing of single-cell RNA-seq

Páll Melsted, A. Sina Booeshaghi, Lauren Liu…·Lior S. Pachter

The paper presents a modular and efficient workflow for single-cell RNA-seq pre-processing using kallisto and bustools, demonstrating its flexibility for RNA velocity analyses.

513 citationstop 1%

scRNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 16, 2018

A direct comparison of genome alignment and transcriptome pseudoalignment

Lynn Yi, Lauren Liu, Páll Melsted, Lior S. Pachter

The paper compares genome alignment and transcriptome pseudoalignment, finding they produce similar quantifications and are interchangeable for many applications.

18 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky