Author

Charlotte Joller

University of BaselORCID 0009-0004-0703-8244Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Klaus SchlaeppiiD· 2 shared Jan WaelchliiD· 1 shared Joëlle SasseiD· 1 shared Joëlle Schläpfer· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersPlant Biology

Klaus SchlaeppiORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintJan 30, 2026

Paralleled Dynamics of Arabidopsis Root Exudation and SynCom Assembly in a Controlled Environment

Charlotte Joller, Jan Waelchli, Joëlle Schläpfer, Klaus Schlaeppi

This study compares two microcosm systems for simultaneously monitoring root exudates and microbial community dynamics, finding that the glass bead system better captures dynamic exudate shifts during bacterial community establishment.

1 citation

Arabidopsismetagenomics

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Plant BiologybioRxivPreprintAug 27, 2024

Time-resolved, integrated multi-omic analysis reveals central role of amino acid pathways for defense responses in Arabidopsis thaliana

Charlotte Joller, Klaus Schlaeppi, Joëlle Sasse

The paper investigates time-resolved multi-omic changes in Arabidopsis thaliana under microbial elicitors, finding amino acids as key early indicators of defense responses.

4 citations

Arabidopsismetabolomics

𝕏 PostBluesky