Author

Bhargav Kanuparthi

ORCID 0009-0005-0732-7692Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:deep learning· 2 Research Focus:drug response / drug discovery· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:mouse· 1

Frequent Co-Authors

Albi CelajiD· 2 shared Brandon VaziD· 2 shared Brendan J. Frey· 2 shared Christopher B. ColeiD· 2 shared Diane LyiD· 2 shared Farhan YusufiD· 2 shared Ken J. KroniD· 2 shared Omar WagihiD· 2 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Albi CelajORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMay 15, 2025

Sequence based prediction of cell type specific microRNA binding and mRNA degradation for therapeutic discovery

Bhargav Kanuparthi, Sara E. Pour, Scott D. Findlay…·Brendan J. Frey

This paper introduces REPRESS, a deep learning model that predicts cell-type-specific microRNA binding and mRNA degradation from RNA sequences, outperforming existing methods in multiple tasks.

3 citations

humanmouse

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BioinformaticsbioRxivPreprintSep 20, 2023

An RNA foundation model enables discovery of disease mechanisms and candidate therapeutics

Albi Celaj, Alice Jiexin Gao, Tammy Lau…·Brendan J. Frey

The paper introduces BigRNA, an RNA foundation model that predicts RNA biology from DNA sequence and identifies therapeutic effects of SBOs on gene expression and splicing.

29 citations

humanDNA methylation

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