Author

Ellie Bourgikos

Yale UniversityORCID 0009-0005-2777-2101Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:host-pathogen & immune response· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Chantal B. F. VogelsiD· 3 shared Alexander T. CiotaiD· 2 shared Mallery I. BrebaniD· 2 shared Nathan D. GrubaughiD· 2 shared Nicole M. FeriancekiD· 2 shared Verity HilliD· 2 shared Afeez K. SodeindeiD· 1 shared Aiman SabaawyiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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Focal author (center)Selected co-authorORCID co-authorUnlinked name

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3 shared papersMicrobiology

Chantal B. F. VogelsORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

EcologybioRxivPreprintJan 10, 2026

Evolutionary history of Jamestown Canyon virus disentangles complex multi-vector ecology

Ellie Bourgikos, Simon Dellicour, Philippe Lemey…·Nathan D. Grubaugh

This study uses whole-genome sequencing and phylodynamic methods to analyze the evolutionary history and ecological dynamics of Jamestown Canyon virus, revealing its slow evolution and transmission patterns.

DOI 10.64898/2026.01.09.698726

whole-genome sequencingstatistical model

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MicrobiologybioRxivPreprintSep 18, 2025

Heterogeneity in inhibition of genetically diverse dengue virus strains by Wolbachia

Afeez K. Sodeinde, Emilie Finch, Ke Li…·Chantal B. F. Vogels

This study evaluates the inhibition of genetically diverse dengue virus strains by two Wolbachia strains, finding differential effectiveness and implications for control strategies.

1 citation

virusstatistical model

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MicrobiologybioRxivPreprintJun 6, 2025

A Comprehensive Hybrid Capture Sequencing Platform for Tick-borne Disease Detection Reveals Zoonotic Emerging Pathogens in a Weather and Vector Transition Zone

Chloe M. Murrell, Ximena A. Olarte‐Castillo, X.-D. Wang…·Laura B. Goodman

This paper develops a hybrid capture sequencing platform for tick-borne disease detection, identifying emerging pathogens and ecological transmission networks in New York.

DOI 10.1101/2025.06.06.658355

humanmouse

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