Aurélie Berard

The paper identifies QTLs and Vat homolog alleles associated with resistance to the A. gossypii CUC1 clone in melon using GWAS and pan-genome analyses.

The paper develops SNP markers for DUS testing in tomato, identifies marker-trait associations, and evaluates their discriminatory power for variety distinction.

The paper develops and validates a 30K SNP genotyping tool for flax breeding, showing high polymorphism and genotyping accuracy.

The paper reconstructs NLR regions in melon accessions and uses pan-NLRome GWAS to identify resistance genes against Fusarium wilt and zucchini yellow mosaic virus.

The paper demonstrates Nanopore Adaptive Sampling (NAS) for enriching and reconstructing resistance genes in melon genomes, showing fourfold enrichment and accurate assembly across subspecies.

The paper presents high-quality genome assemblies for five melon accessions using Oxford Nanopore sequencing, highlighting their genomic diversity and utility for research on disease resistance and breeding.

The paper develops a DNA bulk SNP genotyping method for landraces and applies it to maize, showing accurate allelic frequency estimation and low ascertainment bias.

The paper develops a method for rapid genomic resource creation in orphan species, applied to Lavandula angustifolia, identifying 400K polymorphic sites and high SNP frequency.

This study imputes low-density SNP panels to whole genome sequences in black poplar trees, achieving high accuracy and showing the impact of relatedness and SNP density on imputation quality.

The paper presents a high-quality reference genome for Rosa chinensis, elucidating genome structure and genetic basis of ornamental traits.