Aurélie Canaguier

The paper identifies QTLs and Vat homolog alleles associated with resistance to the A. gossypii CUC1 clone in melon using GWAS and pan-genome analyses.

The paper reconstructs NLR regions in melon accessions and uses pan-NLRome GWAS to identify resistance genes against Fusarium wilt and zucchini yellow mosaic virus.

The paper demonstrates Nanopore Adaptive Sampling (NAS) for enriching and reconstructing resistance genes in melon genomes, showing fourfold enrichment and accurate assembly across subspecies.

The paper presents high-quality genome assemblies for five melon accessions using Oxford Nanopore sequencing, highlighting their genomic diversity and utility for research on disease resistance and breeding.

This paper evaluates Oxford Nanopore and Bionano Genomics technologies for detecting structural variations in Arabidopsis thaliana, finding that ONT provides more specific SVs while Bionano better characterizes large SVs.