Author

Aileen Qi

Johns Hopkins UniversityORCID 0009-0006-4720-1725Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:imaging· 1 Organism:mouse· 1 Organism:plant (other)· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

David A. BakeriD· 1 shared Dingchang LiniD· 1 shared Dwight E. BerglesiD· 1 shared Gen LiiD· 1 shared Hongru YangiD· 1 shared Jiaxi Lu· 1 shared Patrick Parker· 1 shared Shunzhi WangiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioengineering

David A. BakerORCID

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2 papers

Recent·Most cited

BioengineeringNaturePeer-reviewedMar 3, 2026

Genetically encoded assembly recorder temporally resolves cellular histories in cellulo and in vivo

Yuqing Yan, Jiaxi Lu, Zhe Li…·Dingchang Lin

This paper introduces GEMINI, a tool that records cellular activity histories with high temporal resolution, and demonstrates its application in tracking transcriptional changes and inflammation dynamics in vivo.

4 citationstop 2%

mousehuman

𝕏 PostBluesky

GenomicsThe Plant GenomePeer-reviewedSep 30, 2022

Genome-wide investigation of multiplexed CRISPR-Cas12a-mediated editing in rice

Yingxiao Zhang, Yuechao Wu, Gen Li…·Yiping Qi

The paper investigates off-target effects of multiplexed CRISPR-Cas12a editing in rice using whole-genome sequencing and finds low-frequency chromosomal deletions and duplications with high DSB numbers.

17 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky