Léa Vandamme

The paper introduces K2Rmini, a tool that efficiently filters sequences based on k-mer matches, achieving 2 Gbp/s on a consumer laptop.

The paper introduces Onika, a system using inverted indexes for efficient sequence similarity search, improving scalability and performance over existing tools.

K2R efficiently indexes sequencing datasets to identify reads containing specific k-mers, outperforming existing methods in speed and resource usage.