Author

Yasmin Ara Begum

International Centre for Diarrhoeal Disease ResearchORCID 0009-0007-2703-4832Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:chromatin & epigenetic regulation· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Eric Jorge NelsoniD· 2 shared Firdausi QadriiD· 2 shared Md. Abu SayeediD· 2 shared Taufiqur Rahman BhuiyaniD· 2 shared Aline CuénodiD· 1 shared Ashraful Islam KhaniD· 1 shared Ashraful Islam KhaniD· 1 shared Ashton Creasy-MarrazzoiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersMicrobiology

Eric Jorge NelsonORCID

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2 papers

Recent·Most cited

MicrobiologyMicrobial GenomicsPeer-reviewedJul 25, 2025

Vibrio cholerae lineage and pangenome diversity varies geographically across Bangladesh over one year

Chuhan Qin, Patrick Lypaczewski, Md. Abu Sayeed…·B. Jesse Shapiro

This study sequenced V. cholerae genomes from Bangladesh in 2018, revealing geographic variation in lineage dominance and pangenome diversity across regions.

4 citations

viruswhole-genome sequencing

𝕏 PostBluesky

ImmunologyJournal of Clinical MicrobiologyPeer-reviewedDec 31, 2024

Assembly and performance of a cholera RDT prototype that detects both Vibrio cholerae and associated bacteriophage as a proxy for pathogen detection

Md. Abu Sayeed, Imrul Kayes Nabil, Piyash Bhattacharjee…·Eric Jorge Nelson

The paper develops a cholera RDT that detects both Vibrio cholerae and the bacteriophage ICP1, demonstrating its ability to detect ICP1 as a proxy for pathogen presence.

3 citations

experimental assay

𝕏 PostBluesky