Author

Niki Christopoulou

University of EdinburghORCID 0009-0007-2777-032XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

Sander GrannemaniD· 2 shared Davide CazzolaiD· 1 shared Felipe CavaiD· 1 shared Gabriel TorrensiD· 1 shared Hugh McCaughaniD· 1 shared Iain W. McNaeiD· 1 shared Liang‐Cui ChuiD· 1 shared Matthieu BlandenetiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBiochemistry

Sander GrannemanORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Characterisation of the RNA-Binding Properties of the MRSA β-lactam resistance enzyme PBP2a

Niki Christopoulou, Ngo Hong Duong, Pedro Arêde Rei, Gabriel Torrens, Matthieu Blandenet, Felipe Cava, Sander Granneman

This study identifies PBP2a as an RNA-binding protein in MRSA, showing it interacts with hundreds of transcripts and its RNA-binding activity is crucial for oxacillin resistance.

bioRxiv · Jul 7, 2026 · PreprintBiochemistry

pyRBDome: A comprehensive computational platform for enhancing and interpreting RNA-binding proteome data

Liang‐Cui Chu, Niki Christopoulou, Hugh McCaughan, Sophie Winterbourne, Davide Cazzola, Shichao Wang, Ulad Litvin, Salomé Brunon, Patrick J.B. Harker, Iain W. McNae, Sander Granneman

pyRBDome enhances and interprets RNA-binding proteome data by integrating machine learning predictions and structural data to improve RBS detection and reduce false positives.

bioRxiv · Dec 8, 2023 · PreprintSystems Biology