Author

Jonathan A. Garlick

Tufts UniversityORCID 0009-0008-9500-6435Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Diana M. ToledoiD· 2 shared Dillon PopovichiD· 2 shared Helen C. JarnaginiD· 2 shared Michael L. WhitfieldiD· 2 shared Patricia Ann PioliiD· 2 shared Rezvan ParviziiD· 2 shared Tamar R. AbeliD· 2 shared Avi SmithiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Diana M. ToledoORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintApr 3, 2024

RUNX1 is Expressed in a Subpopulation of Dermal Fibroblasts and Higher RUNX1 Levels are Associated with the Severity of Systemic Sclerosis

Rezvan Parvizi, Zhiyun Gong, Helen C. Jarnagin…·Michael L. Whitfield

This study shows RUNX1 is expressed in SSc fibroblasts and higher levels correlate with fibrosis severity, with hypomethylation and inhibitor effects supporting its role in fibrosis.

DOI 10.1101/2024.04.03.587966

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintMar 22, 2024

Single-cell epigenomic dysregulation of Systemic Sclerosis fibroblasts via CREB1/EGR1 axis in self-assembled human skin equivalents

Tamar R. Abel, Noelle N. Kosarek, Rezvan Parvizi…·Michael L. Whitfield

The paper characterizes single-cell transcriptomic and epigenomic features of a 3D skin-like model of systemic sclerosis, identifying fibroblast subpopulations and their interactions with macrophages.

3 citations

humanscRNA-seq

𝕏 PostBluesky